Package index • multimcm

Data Wrangle

Functions used to manipulate and prepare data.

prep_bg_data(): Prepare background data

prep_latent_data(): Prepare Stan data in latent model

default_prior_latent(): Default prior latent variable

prep_S_data(): Prepare posterior survival data for plotting

prep_S_joint_data(<bmcm>): Prepare data for survival plot

prep_S_joint_data(<default>): already extracted matrix

Model Fitting

Functions for fitting and summarising statistical models.

bmcm_stan(): bmcm_stan

precompile_bmcm_model(): Precompile bmcm model

Visualization

Functions to create visual outputs.

cf_forest_plot(): Cure fraction forest plot using Stan output

cf_forest_cutpoint(): Cure fraction forest plot using cut-point Stan output

geom_kaplan_meier(): Geom for Kaplan-Meier ggplot

grid_arrange_shared_legend(): Use single legend for grid of plots

plot_S_joint(): Plot survival curves for joint model and all treatments